Rhodosporidium toruloides Banno 拉丁名
(ATCC® 10788™) 統(tǒng)一編號(hào)
Deposited As Rhodotorula gracilis Rennerfelt
Strain Designations 別名 CBS 14 [ATCC 15385, CCRC 20306, IFO 0559, JCM 3792, JCM 10020, MUCL 30249, NCYC 921, NRRL Y-1091, VKM Y-334, VTT C-71034]
Application 用途 Produces 5'-nucleotides Produces alpha-linolenic acid Produces lipids Produces phenylalanine ammonia-lyase Produces phosphodiesterase
Biosafety Level 生物安全等級(jí) 1
Biosafety classification is based on U.S. Public Health Service Guidelines, it is the responsibility of the customer to ensure that their facilities comply with biosafety regulations for their own country.
Product Format 提供形式 freeze-dried
Storage Conditions 保藏條件
Frozen 冷凍物: -80°C or colder
Freeze-Dried 凍干物: 2°C to 8°C
Live Culture: See Propagation Section
Type Strain 模式菌種 yes
Preceptrol® no
Genome Sequenced Strain Yes Mating Type A1
Comments 注釋 Genome sequencing strain (University of California, Berkeley, USA; RIKEN Center for Life Science Technologies, Japan; Temasek Life Sciences Laboratory, National University of Singapore, Singapore)
Medium 培養(yǎng)基 ATCC® Medium 200: YM agar or YM broth
ATCC® Medium 28: Emmons' modification of Sabouraud's agar
Growth Conditions 生長條件
Temperature 培養(yǎng)溫度: 24°C to 26°C
Atmosphere 需氧情況: Typical aerobic
Sequenced Data 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA gene, partial sequence GGTTTCCGTAGGTGAACCTGCGGAAGGATCATTAGTGAATATTAGGGTGTCCAACTTAACTTGGAGCC
CGACCCTCACTTTCTAACCCTGTGCATTTGTCTTGGGTAGTAGCTTGCGTCAGCGAGCGAATCCCATTTCACTT
ACAAACACAAAGTCTATGAATGTAACAAATTTATAACAAAACAAAACTTTCAACAACGGATCTCTTGGCTCTCG
CATCGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACG
CACCTTGCGCTCCATGGTATTCCGTGGAGCATGCCTGTTTGAGTGTCATGAATTCTTCAACCCACCTCTT
TCTTAGTGAATCAGGCGGTGTTTGGATTCTGAGCGCTGCTGGCTTCGCGGCCTAGCTCGCTCGTAATGCATTAGCATCCGCA
ATCGAACTTCGGATTGACTCGGCGTAATAGACTATTCGCTGAGGATTCTGGTCTCTGACTGGAGCCGGGTAAGGTT
AAAGGGAGCTACTAATCCTCATGTCTATCTTGAGATTAGACCTCAAATCAGGTAGGACTACCCGCTGAACTTAAGCATATCAATA
D1D2 region of the 26S ribosomal RNA gene ATATCAATAAGCGGAGGAAAAGAAACTAACAAGGATTCCCCTAGTAGCGGCGAGCGAAGCGGGAAGAGCTCAAA
TTTGTAATCTGGCACCTTCGGTGTCCGAGTTGTAATCTCTAGAAGTGTTTTCCGCGTTGGACCGCACACAAGTCT
GTTGGAATACAGCGGCATAGTGGTGATACCCCATTACACGGTGCGGACGCCCAGCGCTTTGTGATACACTTTC
GACGAGTCGAGTTGTTTGGG
AATGCAGCTCAAATTGGGTGGTAAATTCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACC
GTGAGGGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAGTACGTGAAATTGTTGGAAGGGAAACGCTTGAAGT
CAGACTTGCTTGCCGGGCTTGCTCGGTTTGCAGGCCAGCATCAGTTTTCCGGGGCGGATAATGGCAGTTAGAAT
GTAGCAGTCTCGGCTGTGTTATAGCTTTCTGCTGGATACGTCCTGGGGGACTGAGGAACGCAGCGTGCCG
TATGGCGAGGGCTTCGGTCCTTTCACGCTTAGGATGATGATGGAATGGCTTTAAACGAC
Name of Depositor CBS Chain of Custody ATCC <-- CBS <-- E. Rennerfelt strain Burea
Isolation Wood pulp from conifer, Sweden
Cross References Nucleotide (GenBank) : E01783 DNA sequence coding for L-phenylalanine ammonialyase.
Nucleotide (GenBank) : E01784 DNA sequence coding for L-phenylalanine ammonialyase.
Nucleotide (GenBank) : E01785 DNA sequence coding for L-plenylalanine ammonialyase.
Nucleotide (GenBank) : LCTU00000000 Rhodosporidium toruloides strain IFO0559, whole genome shotgun sequencing project
Nucleotide (GenBank) : BCIY00000000 Rhodotorula toruloides strain JCM 10020, whole genome shotgun sequencing project
Nucleotide (GenBank) : LNQQ00000000 Rhodotorula toruloides strain ATCC 10788, whole genome shotgun sequencing project
References Hodgins DS. Yeast phenylalanine ammonia-lyase. Purification, properties, and the identification of catalytically essential dehydroalanine. J. Biol. Chem. 246: 2977-2985, 1971. PubMed: 5102931
Ogata K, et al. Method for the production of 5'-nucleotides. US Patent 3,139,385 dated Jun 30 1964 Turcotte G, Kosaric N. Biosynthesis of lipids by Rhodosporidium toruloides ATCC 10788. J Biotechnol 8: 221-238, 1988.
Grange LM, et al. Effect of various nutrient limitations on fatty acid production by Rhodotorula glutinis. Appl Microbiol Biotechnol 38: 784-789, 1993.
Banno I. Studies on the sexuality of Rhodotorula. J. Gen. Appl. Microbiol. 13: 167-196, 1967.
Fujishima T, et al. Distribution of Phosphodiesterase in bacteria, yeast and actinomycetes [in Japanese]. Hakkokogaku 58: 349-353, 1980.
Adachi O, et al. Crystallization and properties of L-phenylalanine ammonia-lyase from Rhodosporidium toruloides. Agric Biol Chem 54: 2839-2843, 1990.
Yoon SH, Rhee JA. Quantitative physiology of Rhodotorula glutinis for microbial lipid production. Process Biochem. 18(5): 2-4, 1983. Yoon SH, et al. Effect of carbon and nitrogen sources on lipid production of Rhodotorula gracilis. J. Ferment. Technol. 60: 243-246, 1982.
Yoon SH, Rhee JS. Lipid from yeast fermentation: Effects of cultural conditions on lipid production and its characteristics of Rhodotorula glutinis. J. Am. Oil Chem. Soc. 60: 1281-1286, 1983.
Yu X, et al. Oil production by oleaginous yeasts using the hydrolysate from pretreatment of wheat straw with dilute sulfuric acid. Bioresour. Technol. 102: 6134-6140, 2011. PubMed: 21463940
Coelho MA, et al. Identification of mating type genes in the bipolar basidiomycetous yeast Rhodosporidium toruloides: first insight into the MAT locus structure of the Sporidiobolales. Eukaryot. Cell 7: 1053-1061, 2008. PubMed: 18408057
Matheny PB, et al. Resolving the phylogenetic position of the Wallemiomycetes: an enigmatic major lineage of Basidiomycota. Can J Bot 84: 1794-1805, 2006.
Tanabe Y, Watanabe MM, Sugiyama J. Are Microsporidia really related to Fungi?: a reappraisal based on additional gene sequences from basal fungi. Mycol. Res. 106: 1380-1391, 2002.
Hu J, Ji L. Draft genome sequences of Rhodosporidium toruloides strains ATCC 10788 and ATCC 10657 with compatible mating types. Genome Announc 4: e00098-16, 2016. PubMed: 26966203
